Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015833427.1_cds_XP_016505222.1_18582
CDS Infomation

[gene=LOC107823139] [db_xref=GeneID:107823139] [protein=DNA mismatch repair protein MSH7-like isoform X2] [protein_id=XP_016505222.1] [location=join(15823..16082,16899..17451,19721..19816,19930..19985,20448..20514,21034..21120,21379..21510,21644..21677,21777..21824,23718..23917,24002..24128,24237..24529)] [gbkey=CDS]
Sequence

ATGCAGCGGCAGAAATCTATACTCTCCTTCCTCAAGAGACCTTCATCGGAGGACCAAAGC
TCCGGCAACAACAAACTCAAATTTCCAAATCAAAATACAGTCCCTGTTACCAAAAATATT
CCGATTTTGGGAACTGAAACTCCTCCTGAGAAGTTGCCACGTCAGGTTCTCCCCTTCAAC
TGTGGCCATGATGGAAATAAGTCTTCTGCTTTCTCTTCTATTAGGCACAAGTTTATCAGA
GAAAAACCACGCATTGATCGGGATCTAGTGAAGAATGATTCTTTTGGGATCCCCTCTCCT
TGTACAAAAAATGAAGGATCAGAAAGACTGGGGAATCCTTCTATTTCCTTGCAGTCAGGC
TCTAATAGAAGTTCTGTTAGTGCTAATAGAAATAGGAACCAAGAGGGTAAAGGATCAGTA
TCTCTTATACAAGGTGATGATCATGGTTTTGGGCCGGAAACACCAAGTATGCAGCCTTTT
GTACCTGGGTTAAAAAGAGTTCAAGATGACATGCGTAACTCAGCGGATAGGAGTGATTGC
TCTTCATTGAATGCAAGCAAGAGGATTAAGAGTCTTGAGGGTTCGAATTTTGGAGGGAAG
AACCTTGAAGCAGAGTTTGAAATGACTAGCAAGTTTGAGTGGCTTCATCCATCTCAAATC
AAGGATGCGAATGGTAGAATGCCAGGGGACCCACTCTATGACAAGCGAACACTGTTTATT
CCTCCTGATGCATTGAGAAAAATGTCTGCTTCTCAGAAGCAGTATTGGGATGTCAAATGC
AAATACATGGACATTCTGCTTTTCTTTAAAGTGGGAAAATTTTATGAGCTGTATGAGCTA
GATGCTGAAATTGGTCACAAGGAGCTCGATTGGAAAATGACACTAAGTGGCGTGGGAAAA
TGTAGACAGGTTGGCATATCTGAAAGTGGGATAGATGAAGCTGTTCAGAAGCTCCTAGCA
CGAGGGTACAAAGTAGGACGGATGGAACAGTTGGAAACATCTGAGCAAGCAAAATCTAGA
GGCTCTACTTCTGTTATTCGCAGAAAACTAGTTCATGTATTCACTCCTTCTACCACAAGT
GAGGGCAATATTGGGCCTGATGCAGTTCATCTTCTTGCAACTTGCAATGAGCTAGAGAAT
GGTTCAACCACTTTTGGCTTTGCTTTTGTCGATTGTGCTGCTCTGAAAGTTTGGGTTGGT
TCCATAAGCGATGATGCATCTTGTGCAGCTTTGGGGGCTTTGCTGATGCAAGTGTCACCG
AAGGAAGTTATATACGATGCTAGGGGTTTGTCAAAGGATGCTCAAAAAGCTCTGAAAAAA
TACTCATTAACAGGTTCTGCAGCACCACTCCTGTCCCCATTCCAGCCAGGTGCTGATTTT
GTTGATCCTGCAGAAGTGAAAAATTTCCTTGACTTGAAAGGTTACTTTAAAGGATCTTGT
AATAAGTGGGATCACACCTTTGATGGAGTAAGGAGCCATGATGTTGCGTTATGTGCTCTT
GGGAGTCTTGTCAATCATTTAGAGCGATTGATGTTAGATGAGGTCTTACGTAATGGCGAT
ATTCTATCATATGAAGTCTATAGGGGTTGCCTCAAAATGGATGGACAAACACTTGTCAAT
CTTGAGATCTTCAACAATAATGCCGATGGGAGTCCATCAGGTACTTTATACAAGTATCTT
GACAATTGTGTTACTTCACCTGGGAAGCGACTTTTGAGAAACTGGGTTTGTCATCCCCTC
AAAGATGTGGAGAAAATCAACCATAGGCTTGATGTGATTGACAGATTTGTTGAAAATTCA
GAGGCTACATTATCCGCTGCTCAATATCTTCGCAAGCTTCCAGATTTGGATAGGTTGGTT
GGACGGGTTAAGGCTAGCATTCAATCTTCTGAAGCACTCCTACTGCCCTTGATTGGTGCC
AAAATATTGAAGCAGCGAGTAAGTCCTGTTTGA

Peptide Sequence

PEP ID

XP_016505222.1
PEP Infomation

PREDICTED: DNA mismatch repair protein MSH7-like isoform X2 [Nicotiana tabacum]
Sequence

MQRQKSILSFLKRPSSEDQSSGNNKLKFPNQNTVPVTKNIPILGTETPPEKLPRQVLPFN
CGHDGNKSSAFSSIRHKFIREKPRIDRDLVKNDSFGIPSPCTKNEGSERLGNPSISLQSG
SNRSSVSANRNRNQEGKGSVSLIQGDDHGFGPETPSMQPFVPGLKRVQDDMRNSADRSDC
SSLNASKRIKSLEGSNFGGKNLEAEFEMTSKFEWLHPSQIKDANGRMPGDPLYDKRTLFI
PPDALRKMSASQKQYWDVKCKYMDILLFFKVGKFYELYELDAEIGHKELDWKMTLSGVGK
CRQVGISESGIDEAVQKLLARGYKVGRMEQLETSEQAKSRGSTSVIRRKLVHVFTPSTTS
EGNIGPDAVHLLATCNELENGSTTFGFAFVDCAALKVWVGSISDDASCAALGALLMQVSP
KEVIYDARGLSKDAQKALKKYSLTGSAAPLLSPFQPGADFVDPAEVKNFLDLKGYFKGSC
NKWDHTFDGVRSHDVALCALGSLVNHLERLMLDEVLRNGDILSYEVYRGCLKMDGQTLVN
LEIFNNNADGSPSGTLYKYLDNCVTSPGKRLLRNWVCHPLKDVEKINHRLDVIDRFVENS
EATLSAAQYLRKLPDLDRLVGRVKASIQSSEALLLPLIGAKILKQRVSPV

Transcript Sequence

Gene sequence data has not been registered.